Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_21899703_21900639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21899703 - 21900639

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTGTGTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

AATTGTATAACT

Flanking Amino Acid:

KEDQKVLVTYPWHDVRKKYF

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

79.1

37.5

Major BPS

62.7

0.32

1.4

63.4

Major PPT

81.5

0.71

0.9

75.8

38.1

Minor 5ss

-0.2

2.8

71.9

38.1

Minor BPS

54.6

0.22

76.53

39.8

Associated Gene:

Gene:

OLAH

Ensembl Gene ID:

ENSAPLG00000014174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014787

21899254 - 21904055

4802