Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_21921245_21922543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21921245 - 21922543

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAACAAA

5'SS Class:

major

3'SS Sequence:

TAAAATTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

GACACCTAAAAT

Flanking Amino Acid:

RDSVCNYFKTGNISLESKTR

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

69.2

36.9

Major BPS

74.1

0.6

38.9

Major PPT

63.2

0.3

1.1

57.6

46.6

Minor 5ss

38.2

-1.3

44.9

45.1

Minor BPS

49.5

0.04

1.8

64.22

45.3

Associated Gene:

Gene:

CROT

Ensembl Gene ID:

ENSAPLG00000014281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029761

21914936 - 21922678

7743