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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21943580_21944550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21943580 - 21944550

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTCTGTTACA

Flanking Amino Acid:

MYVQNLQVPYRNSVKKAHIF

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.8

0.87

0.8

83.7

31.3

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

57.4

0.23

2.3

78.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029785

21943435 - 21947807

4373