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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21988167_21989525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21988167 - 21989525

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TGAAATTTAAAA

Flanking Amino Acid:

RFYDPLSGEIVFDDKNSKTV

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.8

0.74

0.8

80.8

36.5

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

50.4

0.01

1.6

60.56

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003127

21985992 - 22027915

41924

ENSAPLT00000015752

21985992 - 22027915

41924