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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21992937_21996441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21992937 - 21996441

Intron Length:

3505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

TTCCAGTTAAAA

Flanking Amino Acid:

DKVELEAAGKIATEAIENIR

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

74.1

38.4

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

83.7

0.76

0.8

77.9

35.1

Minor 5ss

-2.2

3.2

40.2

45.9

Minor BPS

46.9

-0.2

2.3

63.19

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015752

21985992 - 22027915

41924

ENSAPLT00000003127

21985992 - 22027915

41924