Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22139137_22139768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22139137 - 22139768

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TTTCTGTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTCTGTTAACA

Flanking Amino Acid:

SGQKQTQSKQRNKINSDKDC

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

80.8

0.69

0.9

76.9

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

64.8

0.46

80.35

35.4

Associated Gene:

Gene:

DBF4

Ensembl Gene ID:

ENSAPLG00000004426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004563

22126980 - 22143778

16799