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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22219201_22233099_F

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22219201 - 22233099
Intron Length:
13899

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAGAATT
5'SS Class:
strong_major
3'SS Sequence:
TTTATGATTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTATGAT
U12 Branch Point Sequence:
ACAGTCTCAATT
Flanking Amino Acid:
EQGGKAVEVKGGEHCYYQGK
Intron Amino Acid Position:
122

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.8
0.82
0.9
87.4
26.6
Major BPS
84.6
0.86
1
74
41.2
Major PPT
81.4
0.71
0.9
78.2
39.9
Minor 5ss
41.1
-1
3.2
58.9
39.4
Minor BPS
49.8
0.07
1.6
62.66
42

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000030216
22148959 - 22246824
97866
ENSAPLT00000042553
22150233 - 22291248
141016
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041795
22150233 - 22291227
140995
ENSAPLT00000041528
22150233 - 22291248
141016
ENSAPLT00000035994
22150233 - 22291248
141016