About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22233183_22237302_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22233183 - 22237302

Intron Length:
4120

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGTCTG

5'SS Class:
major

3'SS Sequence:
TTTACAATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGAATTTTAATA

Flanking Amino Acid:
CCLVNMPWTTDDFHLHSVYK

Intron Amino Acid Position:
32

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
66.8
44.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79
0.65
0.9
75.2
38.5

Minor 5ss
40
-1.1
3
56
42.1

Minor BPS
61.8
0.37
1.2
65.14
35.2

Associated Gene:

Gene:
ADAM22

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22233090 - 22289301
56212