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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22244540_22245508_F

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22244540 - 22245508
Intron Length:
969

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAAGACTG
5'SS Class:
strong_major
3'SS Sequence:
GTTTGTTTTGCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TACTTAT
U12 Branch Point Sequence:
TATAACTTATCT
Flanking Amino Acid:
ELMIVNDHLMCKKHRLSVGH
Intron Amino Acid Position:
243

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82
0.75
1
68.2
42.8
Major BPS
83.6
0.84
0.8
71.9
35.8
Major PPT
86.2
0.81
0.8
80.6
37
Minor 5ss
35.7
-1.6
3.2
45.4
43.6
Minor BPS
59.9
0.39
1.8
79.51
41.8

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035994
22150233 - 22291248
141016
ENSAPLT00000030216
22148959 - 22246824
97866
ENSAPLT00000042553
22150233 - 22291248
141016
ENSAPLT00000026567
22233090 - 22289301
56212
ENSAPLT00000041795
22150233 - 22291227
140995
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041528
22150233 - 22291248
141016