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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22246752_22248765_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
22246752 - 22248765
Intron Length:
2014

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTC|GTACGTAAC
5'SS Class:
major
3'SS Sequence:
CTTTTTGTCAAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GGTAAAT
U12 Branch Point Sequence:
TTTTTGTCAAAG
Flanking Amino Acid:
REKSDAVHLFSGSRFQSSRS
Intron Amino Acid Position:
322

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
63
0.31
1.3
65.2
40.8
Major BPS
49.7
-0
1.4
59
44.6
Major PPT
72.3
0.5
1.1
73.8
34.6
Minor 5ss
36.5
-1.5
2.9
45.6
37
Minor BPS
48
-0.2
2.3
64.47
43.3

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026567
22233090 - 22289301
56212
ENSAPLT00000042553
22150233 - 22291248
141016
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041795
22150233 - 22291227
140995
ENSAPLT00000041528
22150233 - 22291248
141016
ENSAPLT00000035994
22150233 - 22291248
141016