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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22248851_22249311_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22248851 - 22249311
Intron Length:
461

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAGGTGTG
5'SS Class:
strong_major
3'SS Sequence:
TAATTTCTTTCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATCTGAT
U12 Branch Point Sequence:
CTCTTCCTACCT
Flanking Amino Acid:
SLLKGGGVNEFGKTDLMAVT
Intron Amino Acid Position:
351

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
86.1
0.85
0.9
76.2
39.9
Major BPS
82.5
0.81
0.8
71.4
36.6
Major PPT
84.1
0.77
0.8
81.7
35.4
Minor 5ss
34.9
-1.7
3.5
48.2
47.9
Minor BPS
50
0.08
2
71.51
45.7

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041528
22150233 - 22291248
141016
ENSAPLT00000035994
22150233 - 22291248
141016
ENSAPLT00000026567
22233090 - 22289301
56212
ENSAPLT00000042553
22150233 - 22291248
141016
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041795
22150233 - 22291227
140995