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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22253342_22257144_F

Intron Information:

Intron Rank:
15
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22253342 - 22257144
Intron Length:
3803

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATTAAAT
5'SS Class:
major
3'SS Sequence:
TTTTGTCCTGCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TGCCCTTTGATT
Flanking Amino Acid:
GSCLFNKPTKLLDPPECGNG
Intron Amino Acid Position:
432

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.5
0.6
1
75.3
33.9
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
87
0.83
0.7
81.7
30.4
Minor 5ss
41.3
-1
2.9
57.7
46.5
Minor BPS
63.1
0.49
1.2
72.89
38.5

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026567
22233090 - 22289301
56212
ENSAPLT00000042553
22150233 - 22291248
141016
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041795
22150233 - 22291227
140995
ENSAPLT00000041528
22150233 - 22291248
141016
ENSAPLT00000035994
22150233 - 22291248
141016