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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22270980_22273935_F

Intron Information:

Intron Rank:
27
Intron Class:
major-like
Intron Phase:
2
Intron Coordinates:
22270980 - 22273935
Intron Length:
2956

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTCTGCTTT
5'SS Class:
weak_major
3'SS Sequence:
CCTCCTGTTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TAACAAT
U12 Branch Point Sequence:
ATAACAATAACC
Flanking Amino Acid:
STNSASSSKKRSNGLSHSWS
Intron Amino Acid Position:
791

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.4
0.46
1.3
71.4
41.2
Major BPS
57.4
0.18
1.3
65.4
38
Major PPT
77.1
0.61
0.9
68
37.5
Minor 5ss
54.6
0.16
2.5
73.7
43
Minor BPS
49.9
-0
1.9
65.52
38.8

Associated Gene:

Gene:
ADAM22
Ensembl Gene ID:
ENSAPLG00000004784
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035994
22150233 - 22291248
141016
ENSAPLT00000005011
22150233 - 22280129
129897
ENSAPLT00000041795
22150233 - 22291227
140995
ENSAPLT00000041528
22150233 - 22291248
141016