About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_22271067_22273935_F


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22271067 - 22273935

Intron Length:
2869

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGATCC

5'SS Class:
major

3'SS Sequence:
CCTCCTGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAACAAT

U12 Branch Point Sequence:
ATAACAATAACC

Flanking Amino Acid:
ISQNISLFCSRSNGLSHSWS

Intron Amino Acid Position:
681

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.4
0.48
1.2
63.3
35.7

Major BPS
57.4
0.18
1.3
65.4
38

Major PPT
77.1
0.61
0.9
68
37.5

Minor 5ss
41.7
-0.9
2.7
52.4
44.4

Minor BPS
49.9
-0
1.9
65.52
38.8

Associated Gene:

Gene:
ADAM22

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22233090 - 22289301
56212