Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_2275528_2308495_R

Intron Information:

Intron Rank:

155334

Intron Class:

major

Intron Phase:

Intron Coordinates:

2275528 - 2308495

Intron Length:

32968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAATTGAT

5'SS Class:

major

3'SS Sequence:

GTTTTTATTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

69.7

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.3

0.59

1.1

80.4

36.2

Minor 5ss

36.3

-1.6

3.3

50.8

41.1

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042308

2275308 - 2309522

34215