Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_23065861_23067559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23065861 - 23067559

Intron Length:

1699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTCACCTGACTT

Flanking Amino Acid:

QLGPKDASRQVYICSNNVQA

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

75.2

0.57

0.9

70.6

34.3

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

53.8

0.2

1.8

73.39

43.7

Associated Gene:

Gene:

STEAP2

Ensembl Gene ID:

ENSAPLG00000005995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044133

23061005 - 23074540

13536

ENSAPLT00000006205

23061005 - 23074310

13306