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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23125871_23125963_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
23125871 - 23125963

Intron Length:
93

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGAAGA

5'SS Class:
major

3'SS Sequence:
TAATTTCTCCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
CCTGGTTTAATT

Flanking Amino Acid:
RIVAGTGANSSVRALKGEKG

Intron Amino Acid Position:
76

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1.3
71.7
40.1

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
77.8
0.63
0.9
69.9
40.9

Minor 5ss
28.3
-2.5
2.7
32.6
41.6

Minor BPS
51
0.11
1.9
66.31
45.7

Associated Gene:

Gene:
GTPBP10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23121703 - 23137570
15868

23124838 - 23137991
13154