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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23126056_23126651_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
23126056 - 23126651

Intron Length:
596

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGGACT

5'SS Class:
strong_major

3'SS Sequence:
AATTTACTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
GTGTTTTCAATA

Flanking Amino Acid:
SILDDDGKQIGEVNAAGERF

Intron Amino Acid Position:
107

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.9
0.8
0.9
77.9
36.3

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
79.3
0.66
0.9
75.2
39

Minor 5ss
35
-1.7
3.2
47
42.5

Minor BPS
56.2
0.19
1.5
63.43
37.6

Associated Gene:

Gene:
GTPBP10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23121703 - 23137570
15868

23124838 - 23137991
13154