Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_23131784_23134948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23131784 - 23134948

Intron Length:

3165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTATG

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TCTGTTTGAAAC

Flanking Amino Acid:

GKIMYADYKQILVADLPGLI

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

73.9

42.7

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

87.2

0.84

0.8

80.5

Minor 5ss

34.3

-1.8

2.9

42.3

44.5

Minor BPS

-0

1.6

59.4

Associated Gene:

Gene:

GTPBP10

Ensembl Gene ID:

ENSAPLG00000006290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041312

23121703 - 23137570

15868

ENSAPLT00000006539

23124838 - 23137991

13154