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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23322667_23350390_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
23322667 - 23350390

Intron Length:
27724

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGCACA

5'SS Class:
strong_major

3'SS Sequence:
TCTTGCTTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TCCTTTTTAAGA

Flanking Amino Acid:
EGTPFTAIREASLLKGLKHA

Intron Amino Acid Position:
157

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
1
73.3
37.4

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
85.9
0.81
0.8
79.7
32.4

Minor 5ss
45.8
-0.4
2.5
58.4
45.9

Minor BPS
59.9
0.31
1.6
65.59
41.9

Associated Gene:

Gene:
CDK14

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23279420 - 23536404
256985

23286058 - 23536404
250347

23222643 - 23536404
313762

23212061 - 23536404
324344