Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_23643187_23645838_R

Intron Information:

Intron Rank:

131750

Intron Class:

major

Intron Phase:

Intron Coordinates:

23643187 - 23645838

Intron Length:

2652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGGAAT

5'SS Class:

major

3'SS Sequence:

GGTTTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

GGTTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

74.1

35.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

78.3

0.64

0.9

72.5

37.8

Minor 5ss

41.7

-0.9

3.2

56.9

42.1

Minor BPS

47.4

-0.2

1.9

60.47

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020541

23642182 - 23645925

3744