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Intron Name: Anas_platyrhynchos_platyrhynchos_2_237933_245899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

237933 - 245899

Intron Length:

7967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TCGTGATGATTT

Flanking Amino Acid:

LLGSGPLRALDSFVNSQEWT

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

81.9

0.72

0.8

76.3

32.3

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

40.7

-0.6

2.2

57.43

45.6

Associated Gene:

Gene:

AGAP3

Ensembl Gene ID:

ENSAPLG00000009810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020512

161522 - 246527

85006

ENSAPLT00000010208

161522 - 246527

85006