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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23988139_23989851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23988139 - 23989851

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTCCTTTTATT

Flanking Amino Acid:

WTNRILHEYKNLSTSEGVSK

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.7

77.8

35.6

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

0.46

1.6

78.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020368

23986734 - 24003576

16843

ENSAPLT00000007969

23986734 - 24003548

16815