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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23989940_23991574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23989940 - 23991574

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGAAGGAAAACT

Flanking Amino Acid:

ESKKHKQGFLNEENLKSIVP

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

85.5

0.8

0.6

81.7

23.3

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

35.3

-1

2.5

55.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020368

23986734 - 24003576

16843

ENSAPLT00000007969

23986734 - 24003548

16815