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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23994514_23994621_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

23994514 - 23994621

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTTTCTTTA

5'SS Class:

weak_minor

3'SS Sequence:

CAGATAATGGAAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TACCACTGTACA

Flanking Amino Acid:

RCVFSQQIKHWMRLSQETQQ

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.3

-0.1

1.3

53.1

40.3

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

47.2

-0.1

1.2

42.6

Minor 5ss

66.4

0.55

1.8

77.6

37.2

Minor BPS

45.2

-0.3

1.9

56.24

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007969

23986734 - 24003548

16815