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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23996198_23997254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23996198 - 23997254

Intron Length:

1057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

AATCTATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATC

Flanking Amino Acid:

DHWAPIHYACWYGKVEATRM

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

66.7

40.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

0.9

67.2

38.4

Minor 5ss

28.3

-2.5

2.7

37.1

Minor BPS

0.54

1.2

68.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020368

23986734 - 24003576

16843

ENSAPLT00000007969

23986734 - 24003548

16815