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Intron Name: Anas_platyrhynchos_platyrhynchos_2_23998435_24000396_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23998435 - 24000396

Intron Length:

1962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

ATTACCTGAAAA

Flanking Amino Acid:

LTARMLIALDKWLDERHTQS

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

74.8

0.62

1.1

40.5

Major PPT

88.7

0.87

0.6

84.5

23.3

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

0.4

1.6

73.58

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020368

23986734 - 24003576

16843

ENSAPLT00000007969

23986734 - 24003548

16815