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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24001501_24002830_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24001501 - 24002830

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

AATACTGTACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

PISPANQGIKGKRVVLMKKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.16

48.6

43.9

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020368

23986734 - 24003576

16843

ENSAPLT00000007969

23986734 - 24003548

16815