Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_24110151_24110479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24110151 - 24110479

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGGTT

5'SS Class:

major

3'SS Sequence:

GTTGTTTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTCATCTAACG

Flanking Amino Acid:

GRRHIFKLKNPIKAPESVST

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

76.9

38.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.7

0.62

0.9

69.5

41.6

Minor 5ss

36.5

-1.5

3.8

54.6

43.4

Minor BPS

48.2

-0.2

1.9

58.51

42.9

Associated Gene:

Gene:

GATAD1

Ensembl Gene ID:

ENSAPLG00000018481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045526

24109674 - 24113562

3889

ENSAPLT00000027879

24109674 - 24113562

3889