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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24110540_24112475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24110540 - 24112475

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTGATTTAATT

Flanking Amino Acid:

IITAESIFYKGVYYQIGDVI

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.63

0.9

70.2

41.3

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

63.7

0.51

1.6

78.91

37.7

Associated Gene:

Gene:

GATAD1

Ensembl Gene ID:

ENSAPLG00000018481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027879

24109674 - 24113562

3889

ENSAPLT00000045526

24109674 - 24113562

3889