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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24130676_24130831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24130676 - 24130831

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTGAG

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CAATCTTTAATA

Flanking Amino Acid:

GLYVWADFRKFLKSQTFEAE

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

67.8

37.5

Major BPS

0.75

78.6

Major PPT

89.6

0.89

0.6

89.2

19.8

Minor 5ss

39.8

-1.1

3.1

48.4

42.2

Minor BPS

70.2

0.63

1.2

69.05

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027708

24129748 - 24142256

12509

ENSAPLT00000008752

24130502 - 24142214

11713