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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24131215_24132241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24131215 - 24132241

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTGTCCTCAAAG

Flanking Amino Acid:

RTHFMWGFSKDFGMCGIRVG

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

74.1

38.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

70.9

0.47

71.3

33.6

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

63.5

0.28

1.8

69.26

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027708

24129748 - 24142256

12509