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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24134640_24139645_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24134640 - 24139645

Intron Length:

5006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGTGAGT

5'SS Class:

weak_major

3'SS Sequence:

CTTTCCAATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TTTCCAATAAAG

Flanking Amino Acid:

ATLSTVLCDPGFAHLLHPTY

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.1

43.4

Major BPS

73.5

0.58

79.3

29.4

Major PPT

64.8

0.33

1.1

64.8

34.5

Minor 5ss

27.4

-2.6

3.4

36.5

42.6

Minor BPS

49.2

-0.2

65.16

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027708

24129748 - 24142256

12509