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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24139754_24141862_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24139754 - 24141862

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGCTGCTG

5'SS Class:

weak_major

3'SS Sequence:

TTAGGCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTATTTTGAATT

Flanking Amino Acid:

LCFDLIEERVRVDIFAKESL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.09

1.1

47.1

42.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.25

1.1

55.4

43.7

Minor 5ss

29.6

-2.3

3.5

41.3

Minor BPS

67.3

0.62

1.3

81.06

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027708

24129748 - 24142256

12509