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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24149670_24149956_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24149670 - 24149956

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTATGGCAG

5'SS Class:

weak_major

3'SS Sequence:

CTCTGTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TCCTTGTTTACT

Flanking Amino Acid:

IKANYRSKNGEDGTFNQSML

Intron Amino Acid Position:

1183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.1

46.8

43.2

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

72.5

0.51

1.1

70.5

39.1

Minor 5ss

37.5

-1.4

3.3

45.3

Minor BPS

48.8

-0

2.3

70.86

46.3

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008976

24148499 - 24170064

21566