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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24160673_24161385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24160673 - 24161385

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

AGTTGTGTAACT

Flanking Amino Acid:

SGGVLITGGKGSGKSTLAKA

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.1

37.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

92.5

0.96

0.7

88.4

28.6

Minor 5ss

48.1

-0.2

2.5

67.2

43.7

Minor BPS

49.4

0.04

2.4

74.64

42.4

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018263

24160523 - 24170064

9542

ENSAPLT00000008976

24148499 - 24170064

21566