Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_24166170_24167410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24166170 - 24167410

Intron Length:

1241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGTTTG

5'SS Class:

major

3'SS Sequence:

TTAAATGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAT

Flanking Amino Acid:

GETLHVGRVWIPDALRKKLR

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

69.7

43.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.5

0.44

66.4

44.5

Minor 5ss

38.8

-1.3

2.8

41.9

44.6

Minor BPS

70.8

0.73

1.3

85.51

34.3

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018263

24160523 - 24170064

9542

ENSAPLT00000008976

24148499 - 24170064

21566