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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24168388_24168623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24168388 - 24168623

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATAAAA

5'SS Class:

major

3'SS Sequence:

CGCATTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TAATTTATAATT

Flanking Amino Acid:

PLTADDWEILELHASSLERH

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

71.5

33.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

72.9

0.52

0.9

64.2

41.4

Minor 5ss

-1.9

2.9

37.4

41.2

Minor BPS

59.2

0.37

1.5

74.44

36.3

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018263

24160523 - 24170064

9542

ENSAPLT00000008976

24148499 - 24170064

21566