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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24168708_24169661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24168708 - 24169661

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGAAAT

5'SS Class:

major

3'SS Sequence:

TTACTTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CTTTTGTTACTT

Flanking Amino Acid:

EKLGIADGDQVFLEPCSHVS

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

74.5

35.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

77.9

0.63

41.9

Minor 5ss

37.6

-1.4

2.8

49.3

46.6

Minor BPS

49.7

0.05

2.3

74.4

43.5

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018263

24160523 - 24170064

9542

ENSAPLT00000008976

24148499 - 24170064

21566