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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24169806_24169890_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24169806 - 24169890

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGTAACTG

5'SS Class:

weak_major

3'SS Sequence:

CTAAAACTGATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCTTATTT

Flanking Amino Acid:

KFSINREGERGQAVKISCGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.1

48.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

53.5

0.08

1.1

47.2

40.1

Minor 5ss

35.1

-1.7

3.2

38.6

46.5

Minor BPS

0.61

1.6

84.12

Associated Gene:

Gene:

PEX1

Ensembl Gene ID:

ENSAPLG00000008576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008976

24148499 - 24170064

21566

ENSAPLT00000018263

24160523 - 24170064

9542