Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_24314221_24341026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24314221 - 24341026

Intron Length:

26806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTATACTTACCT

Flanking Amino Acid:

LETFEHPNVVRLFDVCTVSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

82.7

0.74

0.8

80.8

31.2

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

67.5

0.63

1.8

86.1

39.5

Associated Gene:

Gene:

CDK6

Ensembl Gene ID:

ENSAPLG00000009363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034674

24207738 - 24341259

133522

ENSAPLT00000009761

24214852 - 24341259

126408