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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24450813_24455568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24450813 - 24455568

Intron Length:

4756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTTCTTTGATA

Flanking Amino Acid:

THFTVIITSAGLEKLAQKGK

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

83.4

27.8

Major BPS

0.85

0.9

39.9

Major PPT

80.7

0.69

0.9

76.3

36.9

Minor 5ss

33.8

-1.9

2.9

41.4

44.7

Minor BPS

74.8

0.77

1.1

77.53

33.6

Associated Gene:

Gene:

HEPACAM2

Ensembl Gene ID:

ENSAPLG00000009516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037558

24449697 - 24469271

19575

ENSAPLT00000009906

24443624 - 24469271

25648