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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24455866_24462423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24455866 - 24462423

Intron Length:

6558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTCAATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCACAATG

Flanking Amino Acid:

ESEQIAPTIYYGPYGLRVKS

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

77.9

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.3

0.75

0.9

33.2

Minor 5ss

36.4

-1.5

2.9

48.3

41.8

Minor BPS

60.8

0.2

1.9

72.93

39.7

Associated Gene:

Gene:

HEPACAM2

Ensembl Gene ID:

ENSAPLG00000009516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037558

24449697 - 24469271

19575

ENSAPLT00000009906

24443624 - 24469271

25648