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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24462709_24463599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24462709 - 24463599

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ACTTTTATAACT

Flanking Amino Acid:

ASEKIQVAVDVPVTQPIVQT

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

84.8

0.78

0.7

80.1

31.6

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

63.4

0.5

1.6

78.49

Associated Gene:

Gene:

HEPACAM2

Ensembl Gene ID:

ENSAPLG00000009516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037558

24449697 - 24469271

19575

ENSAPLT00000009906

24443624 - 24469271

25648