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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24463951_24469201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24463951 - 24469201

Intron Length:

5251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTGTTTATTT

Flanking Amino Acid:

LQCKIYFLLVGICSALKLTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

100

1.24

0.5

100

Major PPT

81.8

0.71

0.9

77.3

35.6

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

54.6

0.22

76.04

41.4

Associated Gene:

Gene:

HEPACAM2

Ensembl Gene ID:

ENSAPLG00000009516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009906

24443624 - 24469271

25648

ENSAPLT00000037558

24449697 - 24469271

19575