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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24474169_24474765_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24474169 - 24474765

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGAAGC

5'SS Class:

weak_major

3'SS Sequence:

AATTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCAACCTTAACT

Flanking Amino Acid:

MYSSGYLMLPGLRSPQESVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.2

54.3

43.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

71.7

0.49

1.1

71.5

37.7

Minor 5ss

35.7

-1.6

3.3

53.1

43.8

Minor BPS

79.1

0.99

1.2

85.9

39.9

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010103

24473835 - 24547308

73474