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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24474835_24482710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24474835 - 24482710

Intron Length:

7876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TGTCACGAAAAT

Flanking Amino Acid:

PIENLRIPSKEELRESREEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

68.6

0.42

1.1

70.9

38.9

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

41.8

-0.5

2.4

64.73

44.9

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474