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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24483518_24486861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24483518 - 24486861

Intron Length:

3344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAC

U12 Branch Point Sequence:

TGTGTATCACCT

Flanking Amino Acid:

RDKLKQQQAAVSKKVADLIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

60.6

0.26

1.3

65.7

Major PPT

78.3

0.64

82.6

32.9

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

44.3

-0.3

2.1

65.63

44.7

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010103

24473835 - 24547308

73474

ENSAPLT00000024313

24472052 - 24547308

75257