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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24489251_24490216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24489251 - 24490216

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTGC

5'SS Class:

major

3'SS Sequence:

TTAACTTCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATTGTTAACT

Flanking Amino Acid:

LAAVICANGRRHLNIAKEGF

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.2

64.3

43.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.3

0.66

0.9

Minor 5ss

-0.5

2.9

62.1

42.5

Minor BPS

62.9

0.48

2.1

42.2

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010103

24473835 - 24547308

73474

ENSAPLT00000024313

24472052 - 24547308

75257