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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24490452_24493050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24490452 - 24493050

Intron Length:

2599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTATTTTATCC

Flanking Amino Acid:

TDVRLSEMLEEEDYPGAIQL

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

67.5

0.39

1.1

65.5

39.8

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

56.8

0.19

1.6

67.21

38.5

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474